mombf - Model Selection with Bayesian Methods and Information Criteria
Model selection and averaging for regression and mixtures, inclusing Bayesian model selection and information criteria (BIC, EBIC, AIC, GIC).
Last updated 1 months ago
openblascppopenmp
7.89 score 7 stars 1 dependents 73 scripts 1.5k downloadscasper - Characterization of Alternative Splicing based on Paired-End Reads
Infer alternative splicing from paired-end RNA-seq data. The model is based on counting paths across exons, rather than pairwise exon connections, and estimates the fragment size and start distributions non-parametrically, which improves estimation precision.
Last updated 4 months ago
immunooncologygeneexpressiondifferentialexpressiontranscriptionrnaseqsequencingcpp
5.02 score 66 scripts 256 downloadsgaga - GaGa hierarchical model for high-throughput data analysis
Implements the GaGa model for high-throughput data analysis, including differential expression analysis, supervised gene clustering and classification. Additionally, it performs sequential sample size calculations using the GaGa and LNNGV models (the latter from EBarrays package).
Last updated 13 days ago
immunooncologyonechannelmassspectrometrymultiplecomparisondifferentialexpressionclassification
4.26 score 1 dependents 9 scripts 325 downloads